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R, STATISTICS, PSYCHOLOGY, OPEN SCIENCE, DATA VISUALIZATION

Articles with the simulation tag

Change over time is not "treatment response"

The term "treatment response" is both easy to understand and simultaneously often used when causal language is clearly unwarranted. In this post, I present a non-technical example of when a naïve subgroup analysis leads to the wrong conclusion that a subgroup of patients is treatment non-responders.

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Estimating treatment effects and ICCs from (G)LMMs on the observed scale using Bayes, Part 1: lognormal models

In this post I show how to make marginal inferences on the untransformed scaled when using multilevel models with a non-linear transformation applied to the dependent variable (a log-transformation is used as an example). Cluster-specific versus population-average (conditional versus marginal) effects are compared using both average effects on the untransformed scale and using relative (multiplicative) effects.

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Confounded dose-response effects of treatment adherence: fitting Bayesian instrumental variable models using brms

Non-randomized comparisons are common in RCTs. In this post I show some examples of confounding and collider bias, using treatment adherence as an example. I present a small simulation study that show that common regression models used in clinical psychology, makes little sense, and that Bayesian instrumental variable regression can be easily fit using the R package brms.

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Expected overestimation of Cohen’s d under publication bias

In this post I will use the theoretical and empirical sampling distribution of Cohen’s d to show the expected overestimation due to selective publishing. I will look at the overestimation for various sample sizes when the population effect is 0, 0.2, 0.5 and 0.8. The conclusion is that you should be weary of effect sizes from small samples, and that the issue is rather with type M (magnitude) errors than type I errors. At least is clinical psychology the pervasive problem is overestimation of effects and not falsely rejecting null hypothesis.

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